Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VCANP13611 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VCANP13611 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VCANP13611 AQP7P5-201ENST00000428759 1049 ntBASIC16.01■□□□□ 0.15
VCANP13611 AQP7P4-201ENST00000447083 1042 ntBASIC16.01■□□□□ 0.15
VCANP13611 AQP7P2-201ENST00000453967 1041 ntBASIC16.01■□□□□ 0.15
VCANP13611 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VCANP13611 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.01■□□□□ 0.15
VCANP13611 KRT18P25-201ENST00000508931 1278 ntBASIC16.01■□□□□ 0.15
VCANP13611 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
VCANP13611 AQP7P3-201ENST00000624547 1041 ntBASIC16.01■□□□□ 0.15
VCANP13611 AC005618.3-201ENST00000624928 458 ntBASIC16.01■□□□□ 0.15
VCANP13611 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.01■□□□□ 0.15
VCANP13611 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VCANP13611 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VCANP13611 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VCANP13611 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VCANP13611 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VCANP13611 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
VCANP13611 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VCANP13611 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
VCANP13611 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
VCANP13611 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
VCANP13611 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VCANP13611 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16■□□□□ 0.15
VCANP13611 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
VCANP13611 AC013467.2-201ENST00000605472 835 ntBASIC16■□□□□ 0.15
VCANP13611 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16■□□□□ 0.15
VCANP13611 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16■□□□□ 0.15
VCANP13611 LYPLA2P1-203ENST00000447689 696 ntBASIC16■□□□□ 0.15
VCANP13611 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 RN7SL163P-201ENST00000583100 276 ntBASIC16■□□□□ 0.15
VCANP13611 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16■□□□□ 0.15
VCANP13611 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16■□□□□ 0.15
VCANP13611 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16■□□□□ 0.15
VCANP13611 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16■□□□□ 0.15
VCANP13611 AC004987.2-201ENST00000395959 1148 ntBASIC16■□□□□ 0.15
VCANP13611 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16■□□□□ 0.15
VCANP13611 AC023141.7-201ENST00000430646 407 ntBASIC16■□□□□ 0.15
VCANP13611 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16■□□□□ 0.15
VCANP13611 AC073150.1-201ENST00000450406 1084 ntBASIC16■□□□□ 0.15
VCANP13611 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16■□□□□ 0.15
VCANP13611 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16■□□□□ 0.15
VCANP13611 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VCANP13611 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16■□□□□ 0.15
VCANP13611 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.99■□□□□ 0.15
VCANP13611 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VCANP13611 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.99■□□□□ 0.15
VCANP13611 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VCANP13611 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.99■□□□□ 0.15
VCANP13611 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
VCANP13611 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VCANP13611 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.99■□□□□ 0.15
VCANP13611 AC012073.1-201ENST00000606114 1108 ntBASIC15.99■□□□□ 0.15
VCANP13611 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCANP13611 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VCANP13611 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.99■□□□□ 0.15
VCANP13611 AC005622.1-201ENST00000636801 1703 ntBASIC15.99■□□□□ 0.15
VCANP13611 AL157791.1-201ENST00000553667 1699 ntBASIC15.99■□□□□ 0.15
VCANP13611 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VCANP13611 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCANP13611 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VCANP13611 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCANP13611 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCANP13611 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VCANP13611 RNMTL1P1-201ENST00000454103 560 ntBASIC15.98■□□□□ 0.15
VCANP13611 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.98■□□□□ 0.15
VCANP13611 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCANP13611 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.98■□□□□ 0.15
VCANP13611 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.98■□□□□ 0.15
VCANP13611 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.98■□□□□ 0.15
VCANP13611 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms