Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RHOQP1-201ENST00000555758 579 ntBASIC17.72■□□□□ 0.43
HOXC6P09630 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXC6P09630 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXC6P09630 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC6P09630 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HOXC6P09630 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC6P09630 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC6P09630 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HOXC6P09630 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC6P09630 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC6P09630 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 BTBD6P1-201ENST00000412176 1267 ntBASIC17.71■□□□□ 0.43
HOXC6P09630 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.71■□□□□ 0.43
HOXC6P09630 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.71■□□□□ 0.43
HOXC6P09630 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.71■□□□□ 0.43
HOXC6P09630 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC6P09630 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC6P09630 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC6P09630 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC6P09630 AC106872.11-201ENST00000605838 421 ntBASIC17.71■□□□□ 0.43
HOXC6P09630 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.71■□□□□ 0.43
HOXC6P09630 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.71■□□□□ 0.43
HOXC6P09630 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC6P09630 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC6P09630 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC6P09630 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC6P09630 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC6P09630 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC6P09630 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC6P09630 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC6P09630 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC6P09630 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC6P09630 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
HOXC6P09630 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.71■□□□□ 0.42
HOXC6P09630 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC6P09630 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HOXC6P09630 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.7■□□□□ 0.42
HOXC6P09630 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HOXC6P09630 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HOXC6P09630 AC092506.1-202ENST00000401022 528 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 AC007969.1-201ENST00000433675 447 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 AC004898.1-201ENST00000451057 766 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 RNA5SP486-201ENST00000515961 83 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 RNA5SP423-201ENST00000517127 109 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.7■□□□□ 0.42
HOXC6P09630 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.7■□□□□ 0.42
HOXC6P09630 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.7■□□□□ 0.42
HOXC6P09630 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 AC006453.4-201ENST00000636949 1252 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC6P09630 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC6P09630 AL138799.1-201ENST00000448213 1675 ntBASIC17.7■□□□□ 0.42
HOXC6P09630 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms