Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN1P07384 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 KLF2P3-201ENST00000451977 1087 ntBASIC15.66■□□□□ 0.1
CAPN1P07384 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN1P07384 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.66■□□□□ 0.1
CAPN1P07384 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CAPN1P07384 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.66■□□□□ 0.1
CAPN1P07384 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN1P07384 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CAPN1P07384 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.66■□□□□ 0.1
CAPN1P07384 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN1P07384 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN1P07384 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 AC011477.6-201ENST00000604980 1927 ntBASIC15.65■□□□□ 0.1
CAPN1P07384 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN1P07384 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CAPN1P07384 AC142381.1-201ENST00000426099 345 ntBASIC15.65■□□□□ 0.1
CAPN1P07384 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.65■□□□□ 0.1
CAPN1P07384 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.65■□□□□ 0.1
CAPN1P07384 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.65■□□□□ 0.1
CAPN1P07384 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CAPN1P07384 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.65■□□□□ 0.1
CAPN1P07384 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CAPN1P07384 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.65■□□□□ 0.1
CAPN1P07384 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
CAPN1P07384 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN1P07384 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
CAPN1P07384 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.1
CAPN1P07384 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CAPN1P07384 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 AC013268.4-201ENST00000637413 2228 ntBASIC15.64■□□□□ 0.09
CAPN1P07384 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CAPN1P07384 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CAPN1P07384 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 MIR943-201ENST00000401286 94 ntBASIC15.64■□□□□ 0.09
CAPN1P07384 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.64■□□□□ 0.09
CAPN1P07384 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN1P07384 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.64■□□□□ 0.09
CAPN1P07384 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN1P07384 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 AC073389.1-201ENST00000595595 795 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms