Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TPM3P06753 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TPM3P06753 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.83■□□□□ 0.44
TPM3P06753 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.83■□□□□ 0.44
TPM3P06753 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM3P06753 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.83■□□□□ 0.44
TPM3P06753 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.83■□□□□ 0.44
TPM3P06753 AC093724.1-201ENST00000448659 1027 ntBASIC17.83■□□□□ 0.44
TPM3P06753 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM3P06753 AP002469.2-201ENST00000531724 424 ntBASIC17.83■□□□□ 0.44
TPM3P06753 AC091304.2-201ENST00000564639 760 ntBASIC17.83■□□□□ 0.44
TPM3P06753 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
TPM3P06753 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.83■□□□□ 0.44
TPM3P06753 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM3P06753 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM3P06753 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM3P06753 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 AC092127.1-201ENST00000567093 3455 ntBASIC17.82■□□□□ 0.44
TPM3P06753 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 AP001282.1-201ENST00000531301 1499 ntBASIC17.82■□□□□ 0.44
TPM3P06753 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM3P06753 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 AC148477.4-201ENST00000613430 1793 ntBASIC17.82■□□□□ 0.44
TPM3P06753 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM3P06753 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.82■□□□□ 0.44
TPM3P06753 SAPCD2P3-201ENST00000455031 850 ntBASIC17.82■□□□□ 0.44
TPM3P06753 OR7E14P-202ENST00000530490 1290 ntBASIC17.82■□□□□ 0.44
TPM3P06753 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TPM3P06753 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.82■□□□□ 0.44
TPM3P06753 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.82■□□□□ 0.44
TPM3P06753 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM3P06753 AL645728.2-201ENST00000641974 660 ntBASIC17.82■□□□□ 0.44
TPM3P06753 AJ011931.1-201ENST00000618749 2492 ntBASIC17.82■□□□□ 0.44
TPM3P06753 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TPM3P06753 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM3P06753 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TPM3P06753 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.81■□□□□ 0.44
TPM3P06753 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TPM3P06753 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TPM3P06753 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 FAM185BP-201ENST00000443595 716 ntBASIC17.81■□□□□ 0.44
TPM3P06753 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.81■□□□□ 0.44
TPM3P06753 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.81■□□□□ 0.44
TPM3P06753 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms