Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VTNP04004 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.26■□□□□ 0.35
VTNP04004 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 ACTG1P3-201ENST00000431775 1114 ntBASIC17.26■□□□□ 0.35
VTNP04004 AC119751.2-201ENST00000504529 210 ntBASIC17.26■□□□□ 0.35
VTNP04004 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.26■□□□□ 0.35
VTNP04004 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.26■□□□□ 0.35
VTNP04004 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.26■□□□□ 0.35
VTNP04004 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VTNP04004 AC233724.13-201ENST00000598383 410 ntBASIC17.26■□□□□ 0.35
VTNP04004 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VTNP04004 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.26■□□□□ 0.35
VTNP04004 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.26■□□□□ 0.35
VTNP04004 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VTNP04004 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VTNP04004 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.25■□□□□ 0.35
VTNP04004 AC024909.3-201ENST00000611513 2257 ntBASIC17.25■□□□□ 0.35
VTNP04004 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.25■□□□□ 0.35
VTNP04004 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VTNP04004 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VTNP04004 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.25■□□□□ 0.35
VTNP04004 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.25■□□□□ 0.35
VTNP04004 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.25■□□□□ 0.35
VTNP04004 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.25■□□□□ 0.35
VTNP04004 MIR6775-201ENST00000617557 69 ntBASIC17.25■□□□□ 0.35
VTNP04004 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.25■□□□□ 0.35
VTNP04004 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.25■□□□□ 0.35
VTNP04004 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VTNP04004 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTNP04004 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 AC010491.1-201ENST00000563101 2797 ntBASIC17.24■□□□□ 0.35
VTNP04004 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VTNP04004 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VTNP04004 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.24■□□□□ 0.35
VTNP04004 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 ANKRD19P-201ENST00000338192 862 ntBASIC17.24■□□□□ 0.35
VTNP04004 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.24■□□□□ 0.35
VTNP04004 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.24■□□□□ 0.35
VTNP04004 ENPP7P5-201ENST00000541031 1031 ntBASIC17.24■□□□□ 0.35
VTNP04004 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 CLUHP6-201ENST00000580789 941 ntBASIC17.24■□□□□ 0.35
VTNP04004 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.24■□□□□ 0.35
VTNP04004 MSTO2P-201ENST00000314835 1709 ntBASIC17.24■□□□□ 0.35
VTNP04004 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VTNP04004 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTNP04004 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms