Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.8□□□□□ -0.2
DHFRP00374 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.8□□□□□ -0.2
DHFRP00374 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.8□□□□□ -0.2
DHFRP00374 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.8□□□□□ -0.2
DHFRP00374 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 AC020765.3-201ENST00000613051 740 ntBASIC13.8□□□□□ -0.2
DHFRP00374 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.8□□□□□ -0.2
DHFRP00374 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DHFRP00374 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.8□□□□□ -0.2
DHFRP00374 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
DHFRP00374 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DHFRP00374 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
DHFRP00374 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DHFRP00374 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DHFRP00374 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DHFRP00374 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.79□□□□□ -0.2
DHFRP00374 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 AC107918.4-201ENST00000641966 3141 ntBASIC13.79□□□□□ -0.2
DHFRP00374 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DHFRP00374 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
DHFRP00374 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.79□□□□□ -0.2
DHFRP00374 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.79□□□□□ -0.2
DHFRP00374 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.79□□□□□ -0.2
DHFRP00374 AC069148.1-201ENST00000608741 768 ntBASIC13.79□□□□□ -0.2
DHFRP00374 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.79□□□□□ -0.2
DHFRP00374 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.79□□□□□ -0.2
DHFRP00374 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 AC016734.2-201ENST00000624325 1377 ntBASIC13.79□□□□□ -0.2
DHFRP00374 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
DHFRP00374 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
DHFRP00374 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.79□□□□□ -0.2
DHFRP00374 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DHFRP00374 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.79□□□□□ -0.2
DHFRP00374 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.78□□□□□ -0.2
DHFRP00374 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DHFRP00374 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.78□□□□□ -0.2
DHFRP00374 DRAXINP1-201ENST00000437611 948 ntBASIC13.78□□□□□ -0.2
DHFRP00374 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.78□□□□□ -0.2
DHFRP00374 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
DHFRP00374 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms