Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
RTN3O95197 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN3O95197 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN3O95197 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN3O95197 AC092364.2-201ENST00000596710 2692 ntBASIC16.72■□□□□ 0.27
RTN3O95197 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RTN3O95197 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN3O95197 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.71■□□□□ 0.27
RTN3O95197 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
RTN3O95197 TPRX2P-201ENST00000535362 881 ntBASIC16.71■□□□□ 0.27
RTN3O95197 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
RTN3O95197 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 AC104581.4-201ENST00000623126 3052 ntBASIC16.71■□□□□ 0.27
RTN3O95197 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RTN3O95197 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.71■□□□□ 0.27
RTN3O95197 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RTN3O95197 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.71■□□□□ 0.27
RTN3O95197 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RTN3O95197 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN3O95197 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN3O95197 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.71■□□□□ 0.27
RTN3O95197 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RTN3O95197 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RTN3O95197 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 AC011477.6-201ENST00000604980 1927 ntBASIC16.7■□□□□ 0.26
RTN3O95197 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 MEIS3P1-201ENST00000495167 958 ntBASIC16.7■□□□□ 0.26
RTN3O95197 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 AC055876.2-201ENST00000531834 546 ntBASIC16.7■□□□□ 0.26
RTN3O95197 API5-211ENST00000534695 560 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
RTN3O95197 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.7■□□□□ 0.26
RTN3O95197 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.7■□□□□ 0.26
RTN3O95197 AC140912.1-201ENST00000577171 1054 ntBASIC16.7■□□□□ 0.26
RTN3O95197 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RTN3O95197 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.7■□□□□ 0.26
RTN3O95197 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.7■□□□□ 0.26
RTN3O95197 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTN3O95197 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.69■□□□□ 0.26
RTN3O95197 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 SLC7A15P-201ENST00000424028 1363 ntBASIC16.69■□□□□ 0.26
RTN3O95197 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.69■□□□□ 0.26
RTN3O95197 TARDBPP1-201ENST00000442013 1203 ntBASIC16.69■□□□□ 0.26
RTN3O95197 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms