Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.93■□□□□ 0.14
RFPL1O75677 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFPL1O75677 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFPL1O75677 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 CICP23-201ENST00000605013 2741 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 AC127383.1-201ENST00000444697 1800 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 AGAP7P-201ENST00000582299 2062 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 AGAP14-201ENST00000624701 2060 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.92■□□□□ 0.14
RFPL1O75677 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 AL138918.1-201ENST00000568306 659 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 LINC00628-201ENST00000628516 1289 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 REXO1L1P-202ENST00000608646 1974 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 FOXO1B-201ENST00000504678 1527 ntBASIC15.92■□□□□ 0.14
RFPL1O75677 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.92■□□□□ 0.14
RFPL1O75677 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.92■□□□□ 0.14
RFPL1O75677 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFPL1O75677 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFPL1O75677 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFPL1O75677 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
RFPL1O75677 LINC01101-201ENST00000622953 1884 ntBASIC15.91■□□□□ 0.14
RFPL1O75677 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.91■□□□□ 0.14
RFPL1O75677 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RFPL1O75677 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 AC002056.1-201ENST00000395613 760 ntBASIC15.91■□□□□ 0.14
RFPL1O75677 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.91■□□□□ 0.14
RFPL1O75677 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RFPL1O75677 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.91■□□□□ 0.14
RFPL1O75677 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.91■□□□□ 0.14
RFPL1O75677 AC243562.2-201ENST00000561247 970 ntBASIC15.91■□□□□ 0.14
RFPL1O75677 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 AC073389.1-201ENST00000595595 795 ntBASIC15.91■□□□□ 0.14
RFPL1O75677 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.91■□□□□ 0.14
RFPL1O75677 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.91■□□□□ 0.14
RFPL1O75677 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFPL1O75677 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.91■□□□□ 0.14
RFPL1O75677 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFPL1O75677 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms