Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 ALG1L6P-201ENST00000515248 758 ntBASIC6.88□□□□□ -1.31
USH2AO75445 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 AC084262.1-201ENST00000567818 751 ntBASIC6.88□□□□□ -1.31
USH2AO75445 AL451007.2-201ENST00000632004 563 ntBASIC6.88□□□□□ -1.31
USH2AO75445 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 POM121L8P-201ENST00000417732 1281 ntBASIC6.88□□□□□ -1.31
USH2AO75445 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 POM121L9P-203ENST00000441984 1285 ntBASIC6.88□□□□□ -1.31
USH2AO75445 AL391280.1-201ENST00000506969 1062 ntBASIC6.88□□□□□ -1.31
USH2AO75445 PAM16-211ENST00000575848 518 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 AC055811.3-201ENST00000584952 686 ntBASIC6.88□□□□□ -1.31
USH2AO75445 AC011247.3-201ENST00000603297 438 ntBASIC6.88□□□□□ -1.31
USH2AO75445 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 E2F3P2-201ENST00000447755 1422 ntBASIC6.88□□□□□ -1.31
USH2AO75445 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 BICD1-207ENST00000551848 1962 ntBASIC6.88□□□□□ -1.31
USH2AO75445 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 SUN1-204ENST00000403868 978 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 LINC00634-202ENST00000505157 222 ntBASIC6.88□□□□□ -1.31
USH2AO75445 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 STUB1-204ENST00000564370 875 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 EML3-212ENST00000494176 2901 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 EML3-216ENST00000529309 2909 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 MST1L-201ENST00000442552 2185 ntBASIC6.88□□□□□ -1.31
USH2AO75445 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC6.88□□□□□ -1.31
USH2AO75445 AC008805.1-201ENST00000590892 364 ntBASIC6.88□□□□□ -1.31
USH2AO75445 AL023803.2-201ENST00000620080 638 ntBASIC6.88□□□□□ -1.31
USH2AO75445 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
USH2AO75445 TNXA-203ENST00000507684 2038 ntBASIC6.88□□□□□ -1.31
USH2AO75445 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 WASH7P-201ENST00000488147 1351 ntBASIC6.87□□□□□ -1.31
USH2AO75445 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 COX20P1-201ENST00000366529 357 ntBASIC6.87□□□□□ -1.31
USH2AO75445 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC6.87□□□□□ -1.31
USH2AO75445 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC6.87□□□□□ -1.31
USH2AO75445 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC6.87□□□□□ -1.31
USH2AO75445 PFN2-206ENST00000461930 606 ntTSL 4 BASIC6.87□□□□□ -1.31
USH2AO75445 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC6.87□□□□□ -1.31
USH2AO75445 AP003398.1-201ENST00000531124 318 ntBASIC6.87□□□□□ -1.31
USH2AO75445 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
USH2AO75445 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC6.87□□□□□ -1.31
USH2AO75445 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC6.87□□□□□ -1.31
USH2AO75445 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC6.87□□□□□ -1.31
USH2AO75445 AC012073.1-201ENST00000606114 1108 ntBASIC6.87□□□□□ -1.31
USH2AO75445 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC6.87□□□□□ -1.31
USH2AO75445 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
USH2AO75445 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC6.87□□□□□ -1.31
USH2AO75445 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 AC134407.2-201ENST00000625089 1978 ntBASIC6.87□□□□□ -1.31
USH2AO75445 AC020916.1-201ENST00000587762 1774 ntBASIC6.87□□□□□ -1.31
USH2AO75445 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USH2AO75445 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms