Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDH16O75309 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 AP002414.3-201ENST00000589352 1468 ntBASIC16.06■□□□□ 0.16
CDH16O75309 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 RPS2P28-201ENST00000314255 741 ntBASIC16.06■□□□□ 0.16
CDH16O75309 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH16O75309 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH16O75309 AC092474.2-201ENST00000424288 719 ntBASIC16.06■□□□□ 0.16
CDH16O75309 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH16O75309 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CDH16O75309 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH16O75309 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH16O75309 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.06■□□□□ 0.16
CDH16O75309 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH16O75309 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH16O75309 REXO1L1P-202ENST00000608646 1974 ntBASIC16.06■□□□□ 0.16
CDH16O75309 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 AJ011931.1-201ENST00000618749 2492 ntBASIC16.05■□□□□ 0.16
CDH16O75309 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH16O75309 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH16O75309 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 AF186996.4-201ENST00000467186 377 ntBASIC16.05■□□□□ 0.16
CDH16O75309 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.05■□□□□ 0.16
CDH16O75309 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 AC005912.2-201ENST00000619492 2400 ntBASIC16.05■□□□□ 0.16
CDH16O75309 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH16O75309 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH16O75309 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH16O75309 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms