Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EXTL3O43909 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.13■□□□□ 0.33
EXTL3O43909 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.13■□□□□ 0.33
EXTL3O43909 AL589987.1-201ENST00000453380 819 ntBASIC17.13■□□□□ 0.33
EXTL3O43909 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
EXTL3O43909 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
EXTL3O43909 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
EXTL3O43909 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.13■□□□□ 0.33
EXTL3O43909 LINC02560-201ENST00000596379 459 ntBASIC17.13■□□□□ 0.33
EXTL3O43909 AC004790.1-201ENST00000612686 536 ntBASIC17.13■□□□□ 0.33
EXTL3O43909 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.13■□□□□ 0.33
EXTL3O43909 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.13■□□□□ 0.33
EXTL3O43909 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EXTL3O43909 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.13■□□□□ 0.33
EXTL3O43909 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EXTL3O43909 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
EXTL3O43909 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.12■□□□□ 0.33
EXTL3O43909 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.12■□□□□ 0.33
EXTL3O43909 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 FAM207CP-201ENST00000443486 507 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 MEIS3P1-201ENST00000495167 958 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 SERBP1P5-201ENST00000510079 1181 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 DOC2GP-202ENST00000514950 1163 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
EXTL3O43909 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.12■□□□□ 0.33
EXTL3O43909 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.12■□□□□ 0.33
EXTL3O43909 AC008761.3-201ENST00000624803 892 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 AC105250.1-201ENST00000509378 2057 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.12■□□□□ 0.33
EXTL3O43909 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 AC092850.2-201ENST00000623821 2697 ntBASIC17.12■□□□□ 0.33
EXTL3O43909 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EXTL3O43909 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EXTL3O43909 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EXTL3O43909 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
EXTL3O43909 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EXTL3O43909 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EXTL3O43909 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.11■□□□□ 0.33
EXTL3O43909 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms