Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.95□□□□□ -0.5
SNAI2O43623 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
SNAI2O43623 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 AC136621.1-201ENST00000624017 2304 ntBASIC11.94□□□□□ -0.5
SNAI2O43623 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 ELK2BP-201ENST00000415014 1224 ntBASIC11.94□□□□□ -0.5
SNAI2O43623 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
SNAI2O43623 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 AL109954.1-202ENST00000564051 2148 ntBASIC11.94□□□□□ -0.5
SNAI2O43623 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.94□□□□□ -0.5
SNAI2O43623 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.94□□□□□ -0.5
SNAI2O43623 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 GGTLC5P-201ENST00000617623 998 ntBASIC11.94□□□□□ -0.5
SNAI2O43623 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.94□□□□□ -0.5
SNAI2O43623 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SNAI2O43623 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SNAI2O43623 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SNAI2O43623 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SNAI2O43623 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.93□□□□□ -0.5
SNAI2O43623 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SNAI2O43623 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SNAI2O43623 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.93□□□□□ -0.5
SNAI2O43623 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
SNAI2O43623 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.93□□□□□ -0.5
SNAI2O43623 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
SNAI2O43623 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.93□□□□□ -0.5
SNAI2O43623 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SNAI2O43623 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms