Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 MIR346-201ENST00000362234 95 ntBASIC11.41□□□□□ -0.58
PAX4O43316 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 HAUS4P1-201ENST00000406739 1145 ntBASIC11.41□□□□□ -0.58
PAX4O43316 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.41□□□□□ -0.58
PAX4O43316 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 CNN2P11-201ENST00000429351 262 ntBASIC11.41□□□□□ -0.58
PAX4O43316 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.41□□□□□ -0.58
PAX4O43316 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.41□□□□□ -0.58
PAX4O43316 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 SLC25A39P2-201ENST00000537614 270 ntBASIC11.41□□□□□ -0.58
PAX4O43316 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 LINC01225-203ENST00000563550 1244 ntBASIC11.41□□□□□ -0.58
PAX4O43316 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.41□□□□□ -0.58
PAX4O43316 MIR4321-201ENST00000592276 80 ntBASIC11.41□□□□□ -0.58
PAX4O43316 AC010326.4-201ENST00000604665 891 ntBASIC11.41□□□□□ -0.58
PAX4O43316 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 AC023511.2-201ENST00000618803 211 ntBASIC11.41□□□□□ -0.58
PAX4O43316 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.41□□□□□ -0.58
PAX4O43316 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
PAX4O43316 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.41□□□□□ -0.58
PAX4O43316 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PAX4O43316 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
PAX4O43316 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 AC022188.1-201ENST00000620960 1664 ntBASIC11.4□□□□□ -0.58
PAX4O43316 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 AP002414.2-201ENST00000591780 3365 ntBASIC11.4□□□□□ -0.58
PAX4O43316 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 AC007950.2-201ENST00000615045 2347 ntBASIC11.4□□□□□ -0.58
PAX4O43316 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
PAX4O43316 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 AL627223.1-201ENST00000416693 442 ntBASIC11.4□□□□□ -0.58
PAX4O43316 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 AC142381.1-201ENST00000426099 345 ntBASIC11.4□□□□□ -0.58
PAX4O43316 AC245100.5-201ENST00000452108 331 ntBASIC11.4□□□□□ -0.58
PAX4O43316 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC11.4□□□□□ -0.58
PAX4O43316 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.4□□□□□ -0.58
PAX4O43316 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 AL691403.2-201ENST00000618460 490 ntBASIC11.4□□□□□ -0.58
PAX4O43316 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
PAX4O43316 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.4□□□□□ -0.58
PAX4O43316 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PAX4O43316 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.4□□□□□ -0.59
PAX4O43316 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
PAX4O43316 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms