Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK2O00526 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK2O00526 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK2O00526 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK2O00526 AL121894.2-201ENST00000602977 491 ntBASIC12.74□□□□□ -0.37
UPK2O00526 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.74□□□□□ -0.37
UPK2O00526 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
UPK2O00526 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 AC009090.5-201ENST00000624886 2285 ntBASIC12.74□□□□□ -0.37
UPK2O00526 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UPK2O00526 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.74□□□□□ -0.37
UPK2O00526 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
UPK2O00526 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UPK2O00526 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 AP3S2-216ENST00000617003 1561 ntBASIC12.73□□□□□ -0.37
UPK2O00526 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 UXT-AS1-201ENST00000590504 1525 ntBASIC12.73□□□□□ -0.37
UPK2O00526 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK2O00526 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK2O00526 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 YBX2P1-201ENST00000394192 760 ntBASIC12.73□□□□□ -0.37
UPK2O00526 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 MIR940-201ENST00000401276 94 ntBASIC12.73□□□□□ -0.37
UPK2O00526 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK2O00526 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.73□□□□□ -0.37
UPK2O00526 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK2O00526 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK2O00526 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.73□□□□□ -0.37
UPK2O00526 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UPK2O00526 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
UPK2O00526 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.73□□□□□ -0.37
UPK2O00526 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
UPK2O00526 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
UPK2O00526 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 AC099063.4-201ENST00000641099 1602 ntBASIC12.73□□□□□ -0.37
UPK2O00526 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UPK2O00526 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK2O00526 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.72□□□□□ -0.37
UPK2O00526 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UPK2O00526 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UPK2O00526 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
UPK2O00526 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.72□□□□□ -0.37
UPK2O00526 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UPK2O00526 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UPK2O00526 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms