Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CACNB4O00305 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.63■□□□□ 0.09
CACNB4O00305 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CACNB4O00305 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 CLK3P2-201ENST00000427566 1453 ntBASIC15.63■□□□□ 0.09
CACNB4O00305 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CACNB4O00305 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CACNB4O00305 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.63■□□□□ 0.09
CACNB4O00305 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.63■□□□□ 0.09
CACNB4O00305 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CACNB4O00305 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.63■□□□□ 0.09
CACNB4O00305 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.63■□□□□ 0.09
CACNB4O00305 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CACNB4O00305 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CACNB4O00305 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CACNB4O00305 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CACNB4O00305 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.62■□□□□ 0.09
CACNB4O00305 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CACNB4O00305 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.62■□□□□ 0.09
CACNB4O00305 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.62■□□□□ 0.09
CACNB4O00305 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CACNB4O00305 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.62■□□□□ 0.09
CACNB4O00305 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.62■□□□□ 0.09
CACNB4O00305 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CACNB4O00305 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CACNB4O00305 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.61■□□□□ 0.09
CACNB4O00305 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CACNB4O00305 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CACNB4O00305 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 TOMM22P5-201ENST00000416399 439 ntBASIC15.61■□□□□ 0.09
CACNB4O00305 RN7SL399P-201ENST00000471648 279 ntBASIC15.61■□□□□ 0.09
CACNB4O00305 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.61■□□□□ 0.09
CACNB4O00305 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.61■□□□□ 0.09
CACNB4O00305 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.61■□□□□ 0.09
CACNB4O00305 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.61■□□□□ 0.09
CACNB4O00305 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.61■□□□□ 0.09
CACNB4O00305 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CACNB4O00305 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms