Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AC012044.1-201ENST00000603431 297 ntBASIC18.73■□□□□ 0.59
NFKBIEO00221 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKBIEO00221 AC103691.2-201ENST00000618824 433 ntBASIC18.73■□□□□ 0.59
NFKBIEO00221 AC068587.8-201ENST00000641239 219 ntBASIC18.73■□□□□ 0.59
NFKBIEO00221 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFKBIEO00221 AC004899.1-201ENST00000424687 1714 ntBASIC18.73■□□□□ 0.59
NFKBIEO00221 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NFKBIEO00221 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.73■□□□□ 0.59
NFKBIEO00221 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKBIEO00221 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NFKBIEO00221 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.73■□□□□ 0.59
NFKBIEO00221 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFKBIEO00221 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NFKBIEO00221 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NFKBIEO00221 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NFKBIEO00221 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.72■□□□□ 0.59
NFKBIEO00221 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 AL136309.1-201ENST00000403917 691 ntBASIC18.72■□□□□ 0.59
NFKBIEO00221 AC006335.1-201ENST00000445200 547 ntBASIC18.72■□□□□ 0.59
NFKBIEO00221 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NFKBIEO00221 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.72■□□□□ 0.59
NFKBIEO00221 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.72■□□□□ 0.59
NFKBIEO00221 RN7SL163P-201ENST00000583100 276 ntBASIC18.72■□□□□ 0.59
NFKBIEO00221 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.72■□□□□ 0.59
NFKBIEO00221 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NFKBIEO00221 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.72■□□□□ 0.59
NFKBIEO00221 ALOX12P2-203ENST00000570921 1945 ntBASIC18.72■□□□□ 0.59
NFKBIEO00221 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NFKBIEO00221 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFKBIEO00221 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NFKBIEO00221 AC007787.1-201ENST00000588095 1583 ntBASIC18.72■□□□□ 0.59
NFKBIEO00221 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NFKBIEO00221 AL157791.1-201ENST00000553667 1699 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NFKBIEO00221 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 AC125604.1-201ENST00000496255 707 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 IGLV3-15-201ENST00000518356 244 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
NFKBIEO00221 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 RTN3P1-201ENST00000536295 711 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 AC242376.1-201ENST00000559033 726 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKBIEO00221 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 ME2P1-201ENST00000426028 1970 ntBASIC18.71■□□□□ 0.59
NFKBIEO00221 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NFKBIEO00221 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKBIEO00221 AL158070.2-201ENST00000623713 1621 ntBASIC18.71■□□□□ 0.58
NFKBIEO00221 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
NFKBIEO00221 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKBIEO00221 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NFKBIEO00221 AC022188.1-201ENST00000620960 1664 ntBASIC18.7■□□□□ 0.58
NFKBIEO00221 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKBIEO00221 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NFKBIEO00221 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms