Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC190387.1-201ENST00000551683 408 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC004233.3-201ENST00000607794 1269 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 FO393414.2-201ENST00000405153 598 ntBASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 HIST3H2BA-201ENST00000436555 524 ntBASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL4A3BPQ9Y5P4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
COL4A3BPQ9Y5P4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL4A3BPQ9Y5P4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 PIN1P1-201ENST00000412108 996 ntBASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 PHKG1P2-201ENST00000457537 863 ntBASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 SDHAP3-202ENST00000515467 728 ntBASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 AC104794.3-201ENST00000566840 1248 ntBASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 AL450472.2-201ENST00000603663 1156 ntBASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
COL4A3BPQ9Y5P4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms