Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB13Q9Y5F0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC046158.3-201ENST00000624947 2558 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 CETN4P-206ENST00000642099 2168 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 NFIC-211ENST00000641145 8399 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 FO393414.2-201ENST00000405153 598 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 KLF2P3-201ENST00000451977 1087 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AL079307.3-201ENST00000556114 283 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 KRT8P12-202ENST00000472924 1397 ntBASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB13Q9Y5F0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 FAM86GP-201ENST00000448322 971 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 PHKG1P2-201ENST00000457537 863 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC125807.1-201ENST00000483097 614 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC019227.1-201ENST00000526902 510 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC051619.7-201ENST00000568314 623 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC083964.1-201ENST00000607549 630 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AC004777.1-201ENST00000624317 287 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB13Q9Y5F0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB13Q9Y5F0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB13Q9Y5F0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB13Q9Y5F0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB13Q9Y5F0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB13Q9Y5F0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB13Q9Y5F0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms