Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 FER1L4-210ENST00000615531 5998 ntBASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 TOMM22P5-201ENST00000416399 439 ntBASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AL391069.4-201ENST00000609583 481 ntBASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
LINC00588Q9Y4M8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
LINC00588Q9Y4M8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
LINC00588Q9Y4M8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 GK-202ENST00000378941 458 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AL512384.1-201ENST00000406683 331 ntBASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00588Q9Y4M8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms