Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AC040169.1-201ENST00000565382 521 ntBASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AC023141.13-201ENST00000604991 943 ntBASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AP001350.2-201ENST00000625104 1094 ntBASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AP003680.1-201ENST00000598970 3660 ntBASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 TOP3BP1-201ENST00000420768 1380 ntBASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
R3HCC1Q9Y3T6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 FAM185BP-201ENST00000443595 716 ntBASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 OR7E47P-204ENST00000575924 449 ntBASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
R3HCC1Q9Y3T6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 BCAR1-209ENST00000546196 1340 ntBASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 HLA-J-202ENST00000469281 1241 ntBASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 AC018845.2-201ENST00000568326 409 ntBASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 AL353732.1-201ENST00000569618 1459 ntBASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms