Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 PGAM1P5-201ENST00000548011 764 ntBASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 AC091544.8-201ENST00000619490 361 ntBASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZC3H4Q9UPT8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 ACTBP8-201ENST00000403258 1108 ntBASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 AC069218.1-201ENST00000435269 762 ntBASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 RN7SL774P-201ENST00000577467 290 ntBASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZC3H4Q9UPT8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 BNIP3P1-202ENST00000550043 1585 ntBASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AC022217.1-201ENST00000521069 738 ntBASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 AL645939.5-201ENST00000606834 243 ntBASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZC3H4Q9UPT8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.96■□□□□ 0.63
ZC3H4Q9UPT8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms