Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 AC090616.6-203ENST00000579186 1945 ntBASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 TOMM22P5-201ENST00000416399 439 ntBASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 BCRP1-201ENST00000444246 691 ntBASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 SPCS2P1-201ENST00000561636 679 ntBASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 AJ011932.1-201ENST00000621707 465 ntBASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHA4Q9UN74 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 SRD5A3P1-201ENST00000603021 949 ntBASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AL096865.1-201ENST00000606796 927 ntBASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHA4Q9UN74 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 CICP6-201ENST00000457191 2729 ntBASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 AC104794.3-201ENST00000566840 1248 ntBASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 AC004790.1-201ENST00000612686 536 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms