Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPO2Q9UMS6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC016694.1-201ENST00000434179 700 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC007274.1-201ENST00000439805 662 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC114812.1-204ENST00000449669 728 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC007551.1-201ENST00000457394 519 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AP001582.1-201ENST00000525856 295 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC079316.1-201ENST00000548397 411 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 GNRHR2-203ENST00000581100 1187 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 MIR4259-201ENST00000584466 101 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AC127383.1-201ENST00000444697 1800 ntBASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPO2Q9UMS6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 MSTO2P-201ENST00000314835 1709 ntBASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 CTBP2P5-201ENST00000454986 1264 ntBASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPO2Q9UMS6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPO2Q9UMS6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPO2Q9UMS6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SYNPO2Q9UMS6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYNPO2Q9UMS6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms