Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 MEP1AP4-201ENST00000423244 1087 ntBASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 MYCLP2-201ENST00000449268 967 ntBASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HDAC6Q9UBN7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 LINC01144-201ENST00000626198 1710 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AC098850.1-201ENST00000419919 790 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AC123567.1-201ENST00000548294 1261 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 CTBP2P3-201ENST00000585629 1255 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 MIR4321-201ENST00000592276 80 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 GGT3P-204ENST00000453783 1664 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AC104640.1-201ENST00000562617 2109 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 AL603832.2-201ENST00000566195 2125 ntBASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.92■□□□□ 0.46
HDAC6Q9UBN7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AC079776.1-201ENST00000401540 1152 ntBASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 HIST3H2BA-201ENST00000436555 524 ntBASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 RN7SL837P-201ENST00000463010 287 ntBASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 ELK1P1-201ENST00000485699 580 ntBASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AC099568.2-201ENST00000609194 695 ntBASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 CYP4F24P-201ENST00000586049 1580 ntBASIC17.91■□□□□ 0.46
HDAC6Q9UBN7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms