Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL20A1Q9P218 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL20A1Q9P218 PDIA3P1-201ENST00000471856 1510 ntBASIC17.76■□□□□ 0.43
COL20A1Q9P218 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.76■□□□□ 0.43
COL20A1Q9P218 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL20A1Q9P218 AL139384.1-201ENST00000612143 3047 ntBASIC17.76■□□□□ 0.43
COL20A1Q9P218 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL20A1Q9P218 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COL20A1Q9P218 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL20A1Q9P218 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
COL20A1Q9P218 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
COL20A1Q9P218 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL20A1Q9P218 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL20A1Q9P218 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 AC234783.1-201ENST00000441761 496 ntBASIC17.75■□□□□ 0.43
COL20A1Q9P218 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.75■□□□□ 0.43
COL20A1Q9P218 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.75■□□□□ 0.43
COL20A1Q9P218 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL20A1Q9P218 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 RPS2P32-201ENST00000439199 892 ntBASIC17.74■□□□□ 0.43
COL20A1Q9P218 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 AC106760.1-201ENST00000508690 800 ntBASIC17.74■□□□□ 0.43
COL20A1Q9P218 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.74■□□□□ 0.43
COL20A1Q9P218 COX11-210ENST00000639671 696 ntBASIC17.74■□□□□ 0.43
COL20A1Q9P218 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL20A1Q9P218 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 AC022188.1-201ENST00000620960 1664 ntBASIC17.74■□□□□ 0.43
COL20A1Q9P218 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
COL20A1Q9P218 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL20A1Q9P218 AC093525.8-201ENST00000624099 1342 ntBASIC17.73■□□□□ 0.43
COL20A1Q9P218 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL20A1Q9P218 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL20A1Q9P218 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms