Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
PARPBPQ9NWS1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 MIR943-201ENST00000401286 94 ntBASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 SERBP1P3-201ENST00000459980 809 ntBASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 RFPL4AP1-201ENST00000530883 850 ntBASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 AL158211.3-201ENST00000607385 239 ntBASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 AC106028.4-201ENST00000614509 607 ntBASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PARPBPQ9NWS1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 FO393414.2-201ENST00000405153 598 ntBASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SPDYE17-201ENST00000412399 783 ntBASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 AC027369.6-201ENST00000525520 931 ntBASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 AC073592.8-201ENST00000624126 511 ntBASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 CYP4F24P-201ENST00000586049 1580 ntBASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PARPBPQ9NWS1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 FO538757.1-201ENST00000623083 1397 ntBASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
PARPBPQ9NWS1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms