Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 AC107918.4-201ENST00000641966 3141 ntBASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PCDHB16Q9NRJ7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.19
PCDHB16Q9NRJ7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AC013268.4-201ENST00000637413 2228 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 VN2R19P-201ENST00000442399 1052 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AC108751.1-201ENST00000490852 363 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AP001005.1-201ENST00000571755 1248 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 OR7E47P-204ENST00000575924 449 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 AC104692.2-201ENST00000603054 253 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 CICP20-201ENST00000443330 2801 ntBASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.89□□□□□ -0.19
PCDHB16Q9NRJ7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms