Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 AC099522.2-201ENST00000607001 744 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 AC008267.7-201ENST00000624570 1194 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ZNF259P1-201ENST00000407656 1365 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 AC097376.2-205ENST00000610159 5334 ntBASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J3Q9H1A7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 AC092127.1-201ENST00000567093 3455 ntBASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 AC004987.2-201ENST00000395959 1148 ntBASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 RPL13AP23-201ENST00000480739 586 ntBASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 AL691432.1-201ENST00000596308 1422 ntBASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J3Q9H1A7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 AC134407.2-201ENST00000625089 1978 ntBASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J3Q9H1A7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 RN7SL589P-201ENST00000481268 310 ntBASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
POLR2J3Q9H1A7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms