Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 AC091046.1-201ENST00000331871 207 ntBASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 MIR769-201ENST00000390225 118 ntBASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 TMEM198B-204ENST00000484016 896 ntBASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 AC007787.1-201ENST00000588095 1583 ntBASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP4Q9C0A0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 AL354877.1-201ENST00000424412 413 ntBASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 MPRIPP1-201ENST00000452433 1089 ntBASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 RN7SL720P-201ENST00000488178 304 ntBASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 AC245884.6-201ENST00000515672 1067 ntBASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 OR10B1P-201ENST00000601666 907 ntBASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 CU633904.3-201ENST00000624042 1029 ntBASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.58■□□□□ 0.73
CNTNAP4Q9C0A0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CNTNAP4Q9C0A0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 CHMP1AP1-201ENST00000445563 662 ntBASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 HIST2H2BB-201ENST00000449108 381 ntBASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 AC004066.1-201ENST00000502488 802 ntBASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.57■□□□□ 0.72
CNTNAP4Q9C0A0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms