Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC023141.5-201ENST00000458585 616 ntBASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXP3Q9BZS1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 LINC00628-201ENST00000628516 1289 ntBASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TCAF2P1-201ENST00000291129 2421 ntBASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 AC134407.2-201ENST00000625089 1978 ntBASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 AC126365.1-201ENST00000578585 1514 ntBASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXP3Q9BZS1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
FOXP3Q9BZS1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.39■□□□□ 0.22
FOXP3Q9BZS1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
FOXP3Q9BZS1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 AC002056.1-201ENST00000395613 760 ntBASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ADH5P3-201ENST00000433842 1137 ntBASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 HLA-J-203ENST00000494367 1087 ntBASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 AC025678.2-201ENST00000562061 970 ntBASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms