Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL645939.2-201ENST00000427340 991 ntBASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 KRT8P44-201ENST00000441609 1350 ntBASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC008267.7-201ENST00000624570 1194 ntBASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 LINC02228-204ENST00000642115 2962 ntBASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SHANK2-AS3Q9BTD1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 RNA5SP410-201ENST00000516285 106 ntBASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC027307.2-201ENST00000591252 911 ntBASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL450472.2-201ENST00000603663 1156 ntBASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.23□□□□□ -0.45
SHANK2-AS3Q9BTD1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms