Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 FAM45BP-202ENST00000592932 1624 ntBASIC14.31□□□□□ -0.12
USB1Q9BQ65 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 POU5F1P6-201ENST00000466990 990 ntBASIC14.31□□□□□ -0.12
USB1Q9BQ65 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AC253576.1-201ENST00000511645 1156 ntBASIC14.31□□□□□ -0.12
USB1Q9BQ65 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AC003101.2-201ENST00000612557 442 ntBASIC14.31□□□□□ -0.12
USB1Q9BQ65 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 TNRC18P2-201ENST00000417666 2714 ntBASIC14.31□□□□□ -0.12
USB1Q9BQ65 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 U82695.1-201ENST00000635752 1889 ntBASIC14.31□□□□□ -0.12
USB1Q9BQ65 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USB1Q9BQ65 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.31□□□□□ -0.12
USB1Q9BQ65 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 AC093214.1-201ENST00000511688 1107 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 RNA5SP410-201ENST00000516285 106 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 DUX4L27-201ENST00000554796 1261 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 AC009948.4-201ENST00000604692 675 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 AC073592.8-201ENST00000624126 511 ntBASIC14.3□□□□□ -0.12
USB1Q9BQ65 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC14.3□□□□□ -0.12
USB1Q9BQ65 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
USB1Q9BQ65 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms