Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF2Q99496 HCG4B-203ENST00000450128 991 ntBASIC12.72□□□□□ -0.37
RNF2Q99496 AL513480.1-201ENST00000451731 511 ntBASIC12.72□□□□□ -0.37
RNF2Q99496 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RNF2Q99496 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF2Q99496 SLC25A1P1-201ENST00000528351 927 ntBASIC12.72□□□□□ -0.37
RNF2Q99496 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.72□□□□□ -0.37
RNF2Q99496 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF2Q99496 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF2Q99496 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.72□□□□□ -0.37
RNF2Q99496 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 AC012569.1-201ENST00000591191 1524 ntBASIC12.72□□□□□ -0.37
RNF2Q99496 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF2Q99496 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 AC087481.3-201ENST00000602886 1894 ntBASIC12.72□□□□□ -0.37
RNF2Q99496 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF2Q99496 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF2Q99496 AC006486.2-201ENST00000624246 2199 ntBASIC12.71□□□□□ -0.37
RNF2Q99496 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RNF2Q99496 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RNF2Q99496 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 AL359258.3-201ENST00000622910 2331 ntBASIC12.71□□□□□ -0.37
RNF2Q99496 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.71□□□□□ -0.37
RNF2Q99496 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 AL137784.3-201ENST00000623858 2288 ntBASIC12.71□□□□□ -0.37
RNF2Q99496 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RNF2Q99496 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 AC007967.2-201ENST00000432613 625 ntBASIC12.71□□□□□ -0.37
RNF2Q99496 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.71□□□□□ -0.37
RNF2Q99496 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.71□□□□□ -0.37
RNF2Q99496 AC064836.3-201ENST00000607928 673 ntBASIC12.71□□□□□ -0.37
RNF2Q99496 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.71□□□□□ -0.37
RNF2Q99496 AC008677.1-201ENST00000519230 1561 ntBASIC12.71□□□□□ -0.37
RNF2Q99496 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF2Q99496 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.71□□□□□ -0.38
RNF2Q99496 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
RNF2Q99496 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF2Q99496 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
RNF2Q99496 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.7□□□□□ -0.38
RNF2Q99496 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RNF2Q99496 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms