Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.46□□□□□ -0.25
CLCC1Q96S66 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 AC008667.4-201ENST00000607370 168 ntBASIC13.46□□□□□ -0.25
CLCC1Q96S66 AC116407.3-201ENST00000623905 1129 ntBASIC13.46□□□□□ -0.25
CLCC1Q96S66 PGM5P2-202ENST00000637225 1043 ntBASIC13.46□□□□□ -0.25
CLCC1Q96S66 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCC1Q96S66 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCC1Q96S66 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCC1Q96S66 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCC1Q96S66 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CLCC1Q96S66 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCC1Q96S66 AC006449.6-201ENST00000612330 2296 ntBASIC13.46□□□□□ -0.26
CLCC1Q96S66 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCC1Q96S66 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.46□□□□□ -0.26
CLCC1Q96S66 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLCC1Q96S66 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 AL031595.1-201ENST00000623969 4709 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 MRPL20P1-201ENST00000400819 433 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 AC098831.1-202ENST00000438821 336 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 AC108073.2-201ENST00000464002 357 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 IGHV3-65-201ENST00000523210 341 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 MIR7706-201ENST00000613747 67 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 CICP24-201ENST00000605464 2705 ntBASIC13.45□□□□□ -0.26
CLCC1Q96S66 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCC1Q96S66 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCC1Q96S66 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms