Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
NR1H4Q96RI1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15□□□□□ -0.01
NR1H4Q96RI1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 NME2-201ENST00000393183 568 ntTSL 2 BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15□□□□□ -0.01
NR1H4Q96RI1 TSPY5P-201ENST00000426936 936 ntBASIC15□□□□□ -0.01
NR1H4Q96RI1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15□□□□□ -0.01
NR1H4Q96RI1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC092647.4-201ENST00000457211 535 ntBASIC15□□□□□ -0.01
NR1H4Q96RI1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 TERC-201ENST00000602385 541 ntBASIC15□□□□□ -0.01
NR1H4Q96RI1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NR1H4Q96RI1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NR1H4Q96RI1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15□□□□□ -0.01
NR1H4Q96RI1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15□□□□□ -0.01
NR1H4Q96RI1 AC087386.2-201ENST00000623212 4637 ntBASIC15□□□□□ -0.01
NR1H4Q96RI1 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15□□□□□ -0.01
NR1H4Q96RI1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15□□□□□ -0.01
NR1H4Q96RI1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H4Q96RI1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 RNF152P1-201ENST00000397754 604 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 HAUS4P1-201ENST00000406739 1145 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AK4P3-201ENST00000418260 669 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 NUS1P1-201ENST00000446295 882 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AC112907.2-201ENST00000448639 330 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 KRT18P38-201ENST00000449496 1282 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.99□□□□□ -0.01
NR1H4Q96RI1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H4Q96RI1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 AC089987.1-201ENST00000551654 2209 ntBASIC14.98□□□□□ -0.01
NR1H4Q96RI1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NR1H4Q96RI1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms