Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 AC138761.1-201ENST00000584393 385 ntBASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 SRD5A3P1-201ENST00000603021 949 ntBASIC16.33■□□□□ 0.2
RPRD1AQ96P16 AC097359.3-201ENST00000603982 1210 ntBASIC16.33■□□□□ 0.2
RPRD1AQ96P16 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 AL607033.1-201ENST00000623900 1599 ntBASIC16.33■□□□□ 0.2
RPRD1AQ96P16 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
RPRD1AQ96P16 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AC068587.6-202ENST00000641839 5619 ntBASIC16.32■□□□□ 0.2
RPRD1AQ96P16 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 SPDYE19P-201ENST00000338590 713 ntBASIC16.32■□□□□ 0.2
RPRD1AQ96P16 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AC074338.1-201ENST00000416825 156 ntBASIC16.32■□□□□ 0.2
RPRD1AQ96P16 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.32■□□□□ 0.2
RPRD1AQ96P16 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 GNAQP1-201ENST00000444815 1067 ntBASIC16.32■□□□□ 0.2
RPRD1AQ96P16 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AC008894.3-201ENST00000624324 3103 ntBASIC16.32■□□□□ 0.2
RPRD1AQ96P16 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPRD1AQ96P16 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 AC004790.1-201ENST00000612686 536 ntBASIC16.31■□□□□ 0.2
RPRD1AQ96P16 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 AC008741.2-201ENST00000612792 3115 ntBASIC16.31■□□□□ 0.2
RPRD1AQ96P16 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
RPRD1AQ96P16 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms