Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AL031133.1-201ENST00000406807 723 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AL031432.2-201ENST00000566714 459 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AL928711.1-201ENST00000570165 459 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 MIR3180-1-201ENST00000580374 94 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 MIR3180-3-201ENST00000584616 94 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AL355877.3-201ENST00000622820 899 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 HSPA7-201ENST00000445535 1927 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 AC041040.2-201ENST00000622926 2899 ntBASIC13.68□□□□□ -0.22
CMTM3Q96MX0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMTM3Q96MX0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 DUSP5P1-201ENST00000441325 1139 ntBASIC13.67□□□□□ -0.22
CMTM3Q96MX0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 FAM185BP-201ENST00000443595 716 ntBASIC13.67□□□□□ -0.22
CMTM3Q96MX0 KRT18P31-201ENST00000506277 1292 ntBASIC13.67□□□□□ -0.22
CMTM3Q96MX0 FAM86EP-206ENST00000510506 987 ntBASIC13.67□□□□□ -0.22
CMTM3Q96MX0 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 AC087388.1-201ENST00000571370 1112 ntBASIC13.67□□□□□ -0.22
CMTM3Q96MX0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.67□□□□□ -0.22
CMTM3Q96MX0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AC136759.1-202ENST00000530858 2194 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.66□□□□□ -0.22
CMTM3Q96MX0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CMTM3Q96MX0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms