Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 COX20P2-201ENST00000452636 358 ntBASIC21.12■□□□□ 0.97
CFAP53Q96M91 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 AC140912.1-201ENST00000577171 1054 ntBASIC21.12■□□□□ 0.97
CFAP53Q96M91 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 AL391069.4-201ENST00000609583 481 ntBASIC21.12■□□□□ 0.97
CFAP53Q96M91 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFAP53Q96M91 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.12■□□□□ 0.97
CFAP53Q96M91 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 AC036164.1-201ENST00000570544 333 ntBASIC21.11■□□□□ 0.97
CFAP53Q96M91 AC027307.3-201ENST00000594262 1100 ntBASIC21.11■□□□□ 0.97
CFAP53Q96M91 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CFAP53Q96M91 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CFAP53Q96M91 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.1■□□□□ 0.97
CFAP53Q96M91 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFAP53Q96M91 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms