Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 AL139010.1-201ENST00000454878 894 ntBASIC18.41■□□□□ 0.54
PGBD1Q96JS3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PGBD1Q96JS3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.4■□□□□ 0.54
PGBD1Q96JS3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 BCRP1-201ENST00000444246 691 ntBASIC18.4■□□□□ 0.54
PGBD1Q96JS3 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.4■□□□□ 0.54
PGBD1Q96JS3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 AL590560.3-201ENST00000623350 461 ntBASIC18.4■□□□□ 0.54
PGBD1Q96JS3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PGBD1Q96JS3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
PGBD1Q96JS3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 TSSK5P-201ENST00000423978 907 ntBASIC18.39■□□□□ 0.53
PGBD1Q96JS3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 HLA-V-204ENST00000476601 1289 ntBASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SPCS2P1-201ENST00000561636 679 ntBASIC18.39■□□□□ 0.53
PGBD1Q96JS3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PGBD1Q96JS3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms