Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 MIR940-201ENST00000401276 94 ntBASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 POLD2P1-201ENST00000511220 997 ntBASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.41■□□□□ 0.54
CHAMP1Q96JM3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.4■□□□□ 0.54
CHAMP1Q96JM3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHAMP1Q96JM3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 AP001005.1-201ENST00000571755 1248 ntBASIC18.39■□□□□ 0.53
CHAMP1Q96JM3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms