Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ITCHQ96J02 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.16■□□□□ 0.02
ITCHQ96J02 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
ITCHQ96J02 AC074386.1-202ENST00000463561 864 ntBASIC15.16■□□□□ 0.02
ITCHQ96J02 AC105233.2-201ENST00000523697 349 ntBASIC15.16■□□□□ 0.02
ITCHQ96J02 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.16■□□□□ 0.02
ITCHQ96J02 AF228730.5-201ENST00000530288 346 ntBASIC15.16■□□□□ 0.02
ITCHQ96J02 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
ITCHQ96J02 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.16■□□□□ 0.02
ITCHQ96J02 AC061975.2-201ENST00000581722 295 ntBASIC15.16■□□□□ 0.02
ITCHQ96J02 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 AC112693.3-201ENST00000624819 1983 ntBASIC15.16■□□□□ 0.02
ITCHQ96J02 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.16■□□□□ 0.02
ITCHQ96J02 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.16■□□□□ 0.02
ITCHQ96J02 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITCHQ96J02 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.16■□□□□ 0.02
ITCHQ96J02 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 BNIP3P1-202ENST00000550043 1585 ntBASIC15.15■□□□□ 0.02
ITCHQ96J02 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.15■□□□□ 0.02
ITCHQ96J02 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.15■□□□□ 0.02
ITCHQ96J02 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.15■□□□□ 0.02
ITCHQ96J02 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 AC112191.1-201ENST00000523689 701 ntBASIC15.15■□□□□ 0.02
ITCHQ96J02 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ITCHQ96J02 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.15■□□□□ 0.02
ITCHQ96J02 AC145285.3-201ENST00000564603 959 ntBASIC15.15■□□□□ 0.02
ITCHQ96J02 AP002472.1-201ENST00000577490 586 ntBASIC15.15■□□□□ 0.02
ITCHQ96J02 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ITCHQ96J02 C18orf15-201ENST00000623680 2534 ntBASIC15.15■□□□□ 0.02
ITCHQ96J02 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITCHQ96J02 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.15■□□□□ 0.02
ITCHQ96J02 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms