Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 AC011676.5-201ENST00000624864 2660 ntBASIC15.88■□□□□ 0.13
SIPA1Q96FS4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SIPA1Q96FS4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 INTS4P2-202ENST00000614726 2019 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 SOCS2P1-201ENST00000417727 557 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AC119751.2-201ENST00000504529 210 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 SNX29P1-201ENST00000548357 1007 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 MIR5189-201ENST00000577370 114 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 AC006449.6-201ENST00000612330 2296 ntBASIC15.87■□□□□ 0.13
SIPA1Q96FS4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIPA1Q96FS4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 AL049840.4-201ENST00000602422 811 ntBASIC15.86■□□□□ 0.13
SIPA1Q96FS4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 AL022328.1-201ENST00000610050 478 ntBASIC15.86■□□□□ 0.13
SIPA1Q96FS4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms