Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 AC148477.8-201ENST00000624298 468 ntBASIC13.87□□□□□ -0.19
CPNE2Q96FN4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.87□□□□□ -0.19
CPNE2Q96FN4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.86□□□□□ -0.19
CPNE2Q96FN4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 AC002056.1-201ENST00000395613 760 ntBASIC13.86□□□□□ -0.19
CPNE2Q96FN4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 RNA5SP415-201ENST00000517246 115 ntBASIC13.86□□□□□ -0.19
CPNE2Q96FN4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 AC243562.2-201ENST00000561247 970 ntBASIC13.86□□□□□ -0.19
CPNE2Q96FN4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 Z83851.2-201ENST00000609564 659 ntBASIC13.86□□□□□ -0.19
CPNE2Q96FN4 AC116407.3-201ENST00000623905 1129 ntBASIC13.86□□□□□ -0.19
CPNE2Q96FN4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CPNE2Q96FN4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE2Q96FN4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms