Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 CNN2P3-201ENST00000450201 906 ntBASIC16.31■□□□□ 0.2
CCDC97Q96F63 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 AC005498.2-205ENST00000593218 784 ntBASIC16.31■□□□□ 0.2
CCDC97Q96F63 AL136317.3-201ENST00000618497 906 ntBASIC16.31■□□□□ 0.2
CCDC97Q96F63 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC97Q96F63 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC97Q96F63 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 BASP1P1-201ENST00000430708 665 ntBASIC16.3■□□□□ 0.2
CCDC97Q96F63 INGX-202ENST00000489074 768 ntBASIC16.3■□□□□ 0.2
CCDC97Q96F63 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 AC109322.1-201ENST00000524499 1264 ntBASIC16.3■□□□□ 0.2
CCDC97Q96F63 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 NIFKP4-201ENST00000567275 1192 ntBASIC16.3■□□□□ 0.2
CCDC97Q96F63 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 AC009093.7-201ENST00000623853 1223 ntBASIC16.3■□□□□ 0.2
CCDC97Q96F63 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC97Q96F63 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC97Q96F63 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AC005622.1-201ENST00000636801 1703 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC97Q96F63 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC97Q96F63 SPCS2P4-201ENST00000436160 681 ntBASIC16.29■□□□□ 0.2
CCDC97Q96F63 TIMM8BP1-201ENST00000452384 211 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms