Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM43Q96BQ3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AC006480.2-201ENST00000609770 1337 ntBASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 NUP210P1-202ENST00000504322 710 ntBASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AC091544.8-201ENST00000619490 361 ntBASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 AC005052.1-201ENST00000625181 2492 ntBASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM43Q96BQ3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM43Q96BQ3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM43Q96BQ3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM43Q96BQ3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRIM43Q96BQ3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM43Q96BQ3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRIM43Q96BQ3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 AL008707.1-201ENST00000422498 534 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 FAM8A4P-201ENST00000435433 1213 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 AC024681.1-201ENST00000521917 487 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 MIR3147-201ENST00000577811 66 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 PPY2P-201ENST00000582808 702 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 RN7SL555P-201ENST00000584742 339 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 AF254983.2-201ENST00000612331 135 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 AP000346.4-201ENST00000614827 381 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 ENPP7P14-201ENST00000621765 1040 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 AC007613.1-201ENST00000572811 2597 ntBASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM43Q96BQ3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms