Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AC241585.1-201ENST00000433527 519 ntBASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AL133215.2-201ENST00000609242 977 ntBASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AC006486.2-201ENST00000624246 2199 ntBASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 AL109954.1-202ENST00000564051 2148 ntBASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCC2Q8TAQ2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AC112693.3-201ENST00000624819 1983 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AC092364.2-202ENST00000597012 1073 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AL590560.3-201ENST00000623350 461 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 AC100757.3-201ENST00000622361 1406 ntBASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCC2Q8TAQ2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 FAM8A3P-201ENST00000427218 844 ntBASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 AL079307.3-201ENST00000556114 283 ntBASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCC2Q8TAQ2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AC127383.1-201ENST00000444697 1800 ntBASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms