Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CRLF3Q8IUI8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CRLF3Q8IUI8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 YBX2P1-201ENST00000394192 760 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 HCG4B-203ENST00000450128 991 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC002347.1-201ENST00000569543 541 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC010327.4-202ENST00000591484 748 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC021097.1-201ENST00000607902 574 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC106881.1-201ENST00000605849 3329 ntBASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CRLF3Q8IUI8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 AC018845.2-201ENST00000568326 409 ntBASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 LINC01101-201ENST00000622953 1884 ntBASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CRLF3Q8IUI8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms