Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 CNN2P2-201ENST00000443536 909 ntBASIC14.37□□□□□ -0.11
ATG4DQ86TL0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 BCRP1-201ENST00000444246 691 ntBASIC14.37□□□□□ -0.11
ATG4DQ86TL0 CNN2P3-201ENST00000450201 906 ntBASIC14.37□□□□□ -0.11
ATG4DQ86TL0 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.37□□□□□ -0.11
ATG4DQ86TL0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 SPCS2P1-201ENST00000561636 679 ntBASIC14.37□□□□□ -0.11
ATG4DQ86TL0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 AL136317.3-201ENST00000618497 906 ntBASIC14.37□□□□□ -0.11
ATG4DQ86TL0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATG4DQ86TL0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AL080243.2-201ENST00000418783 582 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 FAM8A3P-201ENST00000427218 844 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AC125807.1-201ENST00000483097 614 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AC015911.4-201ENST00000588022 1070 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AC011467.4-201ENST00000594891 528 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 AL589739.1-201ENST00000607720 493 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 CETN4P-206ENST00000642099 2168 ntBASIC14.36□□□□□ -0.11
ATG4DQ86TL0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATG4DQ86TL0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms