Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 AC005915.1-201ENST00000624912 2018 ntBASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 AC018892.3-201ENST00000623986 2499 ntBASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 CHCHD2P9-201ENST00000461726 456 ntBASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RGPD4Q7Z3J3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 MIR648-201ENST00000385046 94 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AL627231.1-201ENST00000394467 1125 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 RN7SL81P-201ENST00000493781 261 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AC027237.1-201ENST00000560942 655 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AC100827.2-201ENST00000563214 1194 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 MIR5196-201ENST00000578146 115 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AC138466.4-201ENST00000623965 852 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AC025262.2-201ENST00000623975 1056 ntBASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.45■□□□□ 0.7
RGPD4Q7Z3J3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 HLA-K-203ENST00000430151 1046 ntBASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 AC103810.10-201ENST00000606504 343 ntBASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 AP003392.6-201ENST00000607709 325 ntBASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 AP001527.2-201ENST00000614441 631 ntBASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 DNM1P51-201ENST00000558149 522 ntBASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RGPD4Q7Z3J3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD4Q7Z3J3 AC239868.1-201ENST00000369385 493 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms