Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MIR3909-201ENST00000579518 119 ntBASIC10.6□□□□□ -0.71
SCXQ7RTU7 MPDU1-223ENST00000582151 728 ntBASIC10.6□□□□□ -0.71
SCXQ7RTU7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 AL390955.2-201ENST00000603032 514 ntBASIC10.6□□□□□ -0.71
SCXQ7RTU7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 AC016027.1-202ENST00000607927 1699 ntBASIC10.6□□□□□ -0.71
SCXQ7RTU7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
SCXQ7RTU7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SCXQ7RTU7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 AL035633.1-201ENST00000406139 838 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 SPDYE7P-202ENST00000420373 878 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 RNA5SP421-201ENST00000516864 134 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 SLC25A39P2-201ENST00000537614 270 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 AC026150.2-201ENST00000564693 1156 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 AC051619.7-201ENST00000568314 623 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 MIR4745-201ENST00000577608 62 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 MIR6080-201ENST00000617359 66 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 AC116353.5-201ENST00000638148 1699 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms